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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
23
K562
17
small intestine
14
large intestine
8
GM12878
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
Peyer's patch
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HT-29
2
NAMALWA cell
2
OCI-LY7
2
colonic mucosa
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
CMK
1
DOHH2
1
GM06990
1
GM12875
1
GM12891
1
GM12892
1
GM18505
1
GM19099
1
GM19193
1
HCT-116 cell
1
HL-60
1
KBM-7
1
NB4
1
RPMI8226
1
SU-DHL-6
1
SW480
1
enterocyte of epithelium of small intestine
1
paneth cell
1
rectum smooth muscle tissue
1
small intestine goblet cell
Organ
2
intestine
0
bodily fluid
0
trachea
Date released
2
November, 2021
Software used
2
abc
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
Showing 2 of 2 results
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Download
FileSet
DSR814KVL
released
Annotation file set
: Target gene predictions of Smooth Muscle (Colon) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR483TPA
released
Annotation file set
: Target gene predictions of Smooth Muscle (Colon) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE