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Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
64
kidney
40
right kidney
39
renal cortex interstitium
38
renal pelvis
36
left kidney
11
left renal pelvis
11
right renal pelvis
10
left renal cortex interstitium
9
right renal cortex interstitium
8
HEK293
7
kidney tubule cell
6
epithelial cell of proximal tubule
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
kidney epithelial cell
5
renal cortical epithelial cell
4
ACHN
4
Caki2
4
G401
4
RCC 7860
4
kidney glomerular epithelial cell
4
renal cell carcinoma
3
HEK293T
3
kidney capillary endothelial cell
2
cortex of kidney
2
kidney epithelium
1
left kidney
1
RCC
1
nephron tubule
1
renal connecting tubule
1
renal glomerulus
Organ
4
kidney
Life stage
3
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
accessible chromatin
Showing 4 of 4 results
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Download
FileSet
DSR155SVZ
released
Annotation file set
: Candidate regulatory elements for BSS01481 renal cell carcinoma from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR881RBC
released
Annotation file set
: Target gene predictions for BSS01481 renal cell carcinoma from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887WYK
released
Annotation file set
: Chromatin states for BSS01481 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283ABW
released
Annotation file set
: Histone modifications annotation for Kidney Carcinoma,_Renal_Cell from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP