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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
9
chromatin state
9
target gene predictions
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
11
kidney
4
glomerular visceral epithelial cell
3
renal cortical epithelial cell
3
renal pelvis
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
left renal pelvis
2
renal cortex interstitium
2
right renal pelvis
1
left kidney
1
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
cortex of kidney
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
ureteric bud
Organ
3
kidney
3
ureter
Life stage
1
fetal
Date released
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
macs
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR370KIZ
released
Annotation file set
: Accessible chromatin annotation for Kidney Kidney Pelvis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR497ZOK
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney renal pelvis DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570SAY
released
Annotation file set
: Accessible chromatin annotation of kidney renal pelvis from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP