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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
39
kidney
21
renal cortex interstitium
21
renal pelvis
21
right kidney
18
left kidney
7
left renal cortex interstitium
7
left renal pelvis
7
right renal pelvis
6
right renal cortex interstitium
5
glomerular visceral epithelial cell
5
kidney tubule cell
4
HEK293
4
glomerular endothelial cell
4
kidney glomerular epithelial cell
4
renal cortical epithelial cell
3
ACHN
3
Caki2
3
RCC 7860
3
epithelial cell of proximal tubule
3
kidney epithelial cell
2
G401
2
kidney capillary endothelial cell
2
renal cell carcinoma
1
HEK293T
1
RCC
1
cortex of kidney
1
glomerular epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
Disease term
1
clear cell renal carcinoma
Organ
3
kidney
Life stage
2
adult
Date released
1
February, 2021
1
June, 2020
1
September, 2022
Software used
1
encode-ccres
1
macs
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR461KQV
released
Annotation file set
: Candidate regulatory elements for BSS00160 Caki2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR162JPE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE Caki2
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR035CQD
released
Annotation file set
: Accessible chromatin annotation for Kidney Caki-2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP