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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
9
HEK293
5
ACHN
5
Caki2
5
RCC 7860
4
G401
4
renal cell carcinoma
3
HEK293T
2
glomerular visceral epithelial cell
1
RCC
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
Organ
4
kidney
Life stage
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
kidney cell
Showing 4 of 4 results
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Download
FileSet
DSR225JEJ
released
Annotation file set
: Candidate regulatory elements for BSS00372 G401 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR131OKK
released
Annotation file set
: Target gene predictions for BSS00372 G401 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR437DYO
released
Annotation file set
: Chromatin states for BSS00372 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR093VBX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE G401
Lab:
AMP-T2D consortium
Project:
AMP