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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
primary cell
2
cell line
Biosample term
81
kidney
42
right kidney
40
renal cortex interstitium
40
renal pelvis
36
left kidney
12
left renal cortex interstitium
12
left renal pelvis
12
right renal pelvis
11
right renal cortex interstitium
9
HEK293
5
ACHN
5
Caki2
5
RCC 7860
5
renal cell carcinoma
4
G401
4
cortex of kidney
3
HEK293T
2
glomerular visceral epithelial cell
2
kidney epithelium
1
left kidney
1
RCC
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular epithelium
1
kidney - cortex
1
kidney - medulla
1
metanephros
1
nephron tubule
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
Organ
2
epithelium
2
kidney
Life stage
1
child
Date released
1
January, 2020
1
May, 2020
Software used
1
deltasvm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR372RJW
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney podocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP