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Schema
Citing CMDGA
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Annotation type
20
candidate regulatory elements
10
chromatin state
10
target gene predictions
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
10
kidney
3
glomerular visceral epithelial cell
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
2
renal pelvis
1
ACHN
1
Caki2
1
HEK293
1
RCC 7860
1
cortex of kidney
1
epithelial cell of proximal tubule
1
glomerular epithelium
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
left renal cortex interstitium
1
left renal pelvis
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
renal cortex interstitium
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
ureteric bud
Organ
2
kidney
1
epithelium
Life stage
1
adult
1
embryonic
Date released
1
August, 2021
1
May, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR493RJK
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Intercalated cells
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR452AYJ
released
Annotation file set
: Accessible chromatin of right kidney ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP