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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
12
snDropSeq
6
DNase-seq
4
ChIP-seq
1
RNA-seq
1
scRNA-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
62
kidney
40
right kidney
38
renal cortex interstitium
37
renal pelvis
36
left kidney
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
9
right renal cortex interstitium
8
HEK293
7
kidney tubule cell
5
epithelial cell of proximal tubule
4
ACHN
4
Caki2
4
G401
4
RCC 7860
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
kidney epithelial cell
4
kidney glomerular epithelial cell
4
renal cell carcinoma
4
renal cortical epithelial cell
3
HEK293T
3
kidney capillary endothelial cell
2
cortex of kidney
2
kidney epithelium
1
RCC
1
renal connecting tubule
Organ
4
epithelium
4
kidney
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
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skin of body
Showing 4 of 4 results
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Download
FileSet
DSR225CIF
released
Annotation file set
: Candidate regulatory elements for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR373GGH
released
Annotation file set
: Target gene predictions for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR408VLN
released
Annotation file set
: Chromatin states for BSS00387 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267ZHH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP