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Schema
Citing CMDGA
Clear Filters
Annotation type
5
gene expression
3
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
DNase-seq
1
ATAC-seq
1
ChIP-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
24
kidney
11
renal pelvis
11
right kidney
10
renal cortex interstitium
9
left kidney
4
glomerular visceral epithelial cell
4
kidney tubule cell
3
glomerular endothelial cell
3
kidney glomerular epithelial cell
3
left renal cortex interstitium
3
left renal pelvis
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
2
ACHN
2
Caki2
2
HEK293
2
RCC 7860
2
epithelial cell of proximal tubule
2
kidney epithelial cell
2
renal cell carcinoma
1
G401
1
HEK293T
1
cortex of kidney
1
glomerular epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
Organ
4
epithelium
4
kidney
Life stage
2
child
1
adult
Date released
1
August, 2021
1
January, 2020
1
June, 2020
1
September, 2022
Software used
3
macs
1
r
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
organ_slims!
vasculature
Showing 4 of 4 results
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Download
FileSet
DSR691IPC
released
Annotation file set
: Target gene predictions for BSS00389 glomerular visceral epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR884VIR
released
Annotation file set
: Accessible chromatin from Katalin Susztak 75kidney Project of Podocytes
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR012KGK
released
Annotation file set
: Accessible chromatin annotation for Kidney Glomerular visceral epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855KHX
released
Annotation file set
: Accessible chromatin annotation of kidney podocytes (glomerular visceral epithelial cell) from GSE115961 DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP