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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
gene expression
1
target gene predictions
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
45
kidney
30
right kidney
29
renal cortex interstitium
28
renal pelvis
27
left kidney
8
left renal cortex interstitium
8
left renal pelvis
8
right renal pelvis
7
right renal cortex interstitium
5
kidney tubule cell
4
HEK293
3
ACHN
3
Caki2
3
G401
3
RCC 7860
3
epithelial cell of proximal tubule
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
renal cortical epithelial cell
2
HEK293T
2
renal cell carcinoma
1
RCC
Organ
3
epithelium
3
kidney
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
Software used
1
chromhmm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
organ_slims!
vasculature
Showing 3 of 3 results
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Download
FileSet
DSR601HVF
released
Annotation file set
: Candidate regulatory elements for BSS01092 kidney glomerular epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR902NXV
released
Annotation file set
: Chromatin states for BSS01092 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR166JYG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE kidney glomerular epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP