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Schema
Citing CMDGA
Clear Filters
Annotation type
16
gene expression
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
17
kidney
11
right kidney
10
renal cortex interstitium
10
renal pelvis
9
left kidney
3
left renal cortex interstitium
3
left renal pelvis
3
right renal cortex interstitium
3
right renal pelvis
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
renal cortical epithelial cell
1
left kidney
1
ACHN
1
Caki2
1
G401
1
HEK293
1
HEK293T
1
RCC 7860
1
renal cell carcinoma
Organ
2
epithelium
2
kidney
0
lymphatic vessel
Life stage
1
unknown
Date released
1
May, 2020
1
September, 2022
Software used
1
chromhmm
1
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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FileSet
DSR129CVZ
released
Annotation file set
: Chromatin states for BSS00310 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR347BGE
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP