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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
29
kidney
29
small intestine
27
large intestine
20
renal cortex interstitium
20
right kidney
19
renal pelvis
18
left kidney
11
foreskin keratinocyte
10
sigmoid colon
8
transverse colon
7
Peyer's patch
7
foreskin fibroblast
6
left renal cortex interstitium
6
left renal pelvis
6
right renal pelvis
5
right renal cortex interstitium
4
colonic mucosa
4
duodenal mucosa
4
foreskin melanocyte
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
3
HEK293
3
kidney tubule cell
2
ACHN
2
Caki2
2
EH
2
EL
2
ELR
2
G401
2
HCT116
2
HT-29
2
RCC 7860
2
SW480
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
renal cortical epithelial cell
1
Caco-2
1
HEK293T
1
LoVo
1
RCC
1
RKO
1
colon epithelial cell
1
kidney capillary endothelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
1
renal cell carcinoma
Disease term
1
colorectal adenocarcinoma
Organ
2
intestine
2
large intestine
0
kidney
0
penis
Life stage
2
adult
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR691VDL
released
Annotation file set
: Candidate regulatory elements for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR760JIZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT-29
Lab:
AMP-T2D consortium
Project:
AMP