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Schema
Citing CMDGA
Clear Filters
Annotation type
14
gene expression
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
39
kidney
21
renal cortex interstitium
21
renal pelvis
21
right kidney
18
left kidney
8
testis
7
left renal cortex interstitium
7
left renal pelvis
7
right renal pelvis
6
right renal cortex interstitium
5
glomerular visceral epithelial cell
5
kidney tubule cell
4
HEK293
4
glomerular endothelial cell
4
kidney glomerular epithelial cell
4
renal cortical epithelial cell
3
ACHN
3
Caki2
3
RCC 7860
3
epithelial cell of proximal tubule
3
kidney epithelial cell
2
G401
2
NT2-D1 cell
2
kidney capillary endothelial cell
2
renal cell carcinoma
1
HEK293T
1
NT2/D1
1
RCC
1
cortex of kidney
1
glomerular epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
Organ
4
epithelium
4
kidney
0
testis
Life stage
2
unknown
Date released
1
February, 2021
1
January, 2020
1
June, 2020
1
September, 2022
Software used
2
macs
1
encode-ccres
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR225CIF
released
Annotation file set
: Candidate regulatory elements for BSS00387 glomerular endothelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267ZHH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE glomerular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR885BSZ
released
Annotation file set
: Accessible chromatin annotation for Kidney HRGEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549KDR
released
Annotation file set
: Accessible chromatin annotation of kidney glomerular endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP