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Schema
Citing CMDGA
Clear Filters
Annotation type
5
target gene predictions
4
accessible chromatin
2
binding sites
1
candidate regulatory elements
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
snATAC-seq
1
DNase-seq
Available data
4
bed bed3+
3
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
3
colon epithelial cell
1
HCT-116 cell
1
HT-29
1
RKO
1
SW480
1
large intestine
1
sigmoid colon
1
transverse colon
Organ
4
intestine
4
large intestine
3
epithelium
Date released
3
November, 2021
1
June, 2020
Software used
4
macs
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
Project
3
ENCODE
1
AMP
RFA
3
ENCODE3
1
AMP
Showing 4 of 4 results
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Download
FileSet
DSR609IPL
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR419PGV
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR903BJH
released
Annotation file set
: Accessible chromatin annotation of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR889UTS
released
Annotation file set
: Accessible chromatin annotation for Digestive tract HCT 116 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP