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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
chromatin state
2
target gene predictions
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
2
bed bed3+
2
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
14
large intestine
5
sigmoid colon
4
colonic mucosa
4
transverse colon
3
mucosa of rectum
2
HT-29
2
SW480
2
muscle layer of colon
2
rectum smooth muscle tissue
1
HCT116
1
RKO
1
colon epithelial cell
Organ
4
intestine
4
large intestine
Life stage
2
adult
Date released
2
September, 2022
1
August, 2017
1
February, 2021
Software used
3
chromhmm
1
macs
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR663ZTW
released
Annotation file set
: Chromatin states for BSS00228 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR230SUN
released
Annotation file set
: Chromatin states for BSS00227 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR128RIZ
released
Annotation file set
: Histone modifications annotation for Digestive tract Colonic_mucosa from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR420347
released
Annotation file set
: ChromHMM 13-state model for Colonic mucosa
Lab:
Stephen Parker, UMich
Project:
AMP