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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
4
target gene predictions
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
4
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
cell line
2
tissue
Biosample term
14
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
2
HT-29
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
1
HCT-116 cell
1
SW480
1
rectum smooth muscle tissue
Disease term
1
colorectal adenocarcinoma
Organ
4
intestine
4
large intestine
Life stage
3
adult
Date released
3
September, 2022
1
May, 2021
Software used
3
r
1
abc
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR239RIF
released
Annotation file set
: Target gene predictions for BSS01283 mucosa of rectum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR280IFY
released
Annotation file set
: Target gene predictions for BSS01282 mucosa of rectum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP