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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
3
target gene predictions
2
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
2
H3K27ac ChIP-Seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
cell line
Biosample term
3
colon epithelial cell
2
HCT116
2
sigmoid colon
1
HCT-116 cell
1
HT-29
1
large intestine
1
transverse colon
Organ
3
intestine
3
large intestine
Date released
September, 2022
2
May, 2021
1
March, 2020
Software used
2
abc
1
nospecificsoft_customcode
Lab
2
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
September, 2022
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FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR284ZHE
released
Annotation file set
: enhancer-gene predicton of sigmoid_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR074OIQ
released
Annotation file set
: A target gene prediction annotation in Human Sigmoid Colon of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP