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Schema
Citing CMDGA
Clear Filters
Annotation type
8
candidate regulatory elements
5
target gene predictions
4
chromatin state
1
accessible chromatin
1
eQTL
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
ChIP-seq
1
DNase-seq
Available data
4
bed bed9
1
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
14
large intestine
6
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
colonic mucosa
3
mucosa of rectum
2
HT-29
2
SW480
2
muscle layer of colon
2
rectum smooth muscle tissue
1
HCT-116 cell
1
HCT116
1
RKO
Organ
5
intestine
5
large intestine
Life stage
4
adult
Date released
4
September, 2022
1
June, 2020
Software used
4
chromhmm
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
vasculature
Showing 5 of 5 results
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Download
FileSet
DSR160UQZ
released
Annotation file set
: Chromatin states for BSS01851 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172AJC
released
Annotation file set
: Chromatin states for BSS01850 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096PNG
released
Annotation file set
: Chromatin states for BSS01849 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PKV
released
Annotation file set
: Chromatin states for BSS01848 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR464RYV
released
Annotation file set
: Accessible chromatin annotation for Adipocyte Colon, Transverse from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP