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Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
2
accessible chromatin
1
candidate regulatory elements
1
chromatin state
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
14
large intestine
8
spleen
7
sigmoid colon
6
MCF-7
5
transverse colon
4
colon epithelial cell
4
mammary gland epithelial cell
3
HCT116
3
luminal epithelial cell of mammary gland
2
HT-29
2
T47D
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
2
myoepithelial cell of mammary gland
1
HCT-116 cell
1
SW480
1
fibroblast of mammary gland
1
mammary epithelial cell
1
rectum smooth muscle tissue
Organ
3
epithelium
3
mammary gland
0
large intestine
0
spleen
Life stage
1
adult
Date released
2
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR679CBG
released
Annotation file set
: Target gene predictions for BSS01185 luminal epithelial cell of mammary gland from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE