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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
60
placenta
56
large intestine
40
renal pelvis
23
sigmoid colon
19
transverse colon
12
left renal pelvis
12
right renal pelvis
10
colonic mucosa
9
colon epithelial cell
9
mucosa of rectum
8
HT-29
8
fibroblast of villous mesenchyme
8
muscle layer of colon
7
SW480
6
HCT116
4
HCT-116 cell
4
RKO
4
rectum smooth muscle tissue
3
HTR-8/Svneo
1
Caco-2
1
LoVo
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
rectal smooth muscle tissue
Organ
1
embryo
1
extraembryonic component
1
placenta
0
large intestine
0
ureter
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE