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Schema
Citing CMDGA
Clear Filters
Annotation type
10
candidate regulatory elements
6
target gene predictions
5
chromatin state
3
accessible chromatin
2
binding sites
1
eQTL
1
histone modifications
1
variant allelic effects
Annotation Category
6
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
tissue
1
primary cell
Biosample term
14
large intestine
7
sigmoid colon
5
transverse colon
4
aorta
4
colon epithelial cell
4
endothelial cell of umbilical vein
3
HCT116
3
coronary artery
2
HT-29
2
ascending aorta
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
mucosa of rectum
2
muscle layer of colon
2
thoracic aorta
2
tibial artery
1
HCT-116 cell
1
SW480
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of lymphatic vessel
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
kidney capillary endothelial cell
1
lung microvascular endothelial cell
1
pulmonary artery endothelial cell
1
rectum smooth muscle tissue
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
Organ
5
intestine
5
large intestine
1
brain
1
epithelium
1
vasculature
Life stage
4
adult
1
unknown
Date released
5
September, 2022
1
May, 2021
Software used
5
r
1
abc
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR372VZM
released
Annotation file set
: Target gene predictions for BSS01851 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538EBT
released
Annotation file set
: Target gene predictions for BSS01850 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684ITQ
released
Annotation file set
: Target gene predictions for BSS01849 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195DNM
released
Annotation file set
: Target gene predictions for BSS01848 transverse colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR805XSG
released
Annotation file set
: Target gene predictions for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP