Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
1
accessible chromatin
1
target gene predictions
Annotation Category
5
cis-regulatory elements
1
Target gene links
Annotation type Category
6
DNase-seq
4
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
19
muscle of arm
19
muscle of leg
16
tibial nerve
13
tibial artery
6
gastrocnemius medialis
5
gastrocnemius medialis(Muscle - Skeletal)
4
GM23248
4
lower leg skin
2
hindlimb muscle
2
muscle of leg
2
forelimb muscle
2
limb
2
skin of forearm
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
femur
1
fibroblast of arm
1
hindlimb muscle
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
Organ
6
limb
6
musculature of body
Life stage
4
adult
Date released
September, 2022
4
February, 2021
1
June, 2020
1
May, 2021
Software used
4
encode-ccres
1
abc
1
macs
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
month_released!
September, 2022
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
FileSet
DSR227ZOW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE gastrocnemius medialis
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR833GNU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE gastrocnemius medialis
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR273LUM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE gastrocnemius medialis
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR554LFF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE gastrocnemius medialis
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR734DGW
released
Annotation file set
: enhancer-gene predicton of gastrocnemius_medialis-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR889VCH
released
Annotation file set
: Accessible chromatin annotation for Muscle Gastrocnemius medialis from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP