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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
cell line
Biosample term
67
muscle of arm
58
muscle of leg
54
H1-hESC
25
tibial nerve
23
trophoblast cell
19
tibial artery
18
gastrocnemius medialis
16
H9
16
chorionic villus
11
trophoblast
10
endodermal cell
10
lower leg skin
8
limb
8
mesodermal cell
7
GM23248
6
H7-hESC
6
HUES6
6
HUES8
5
CyT49
5
H4
5
HUES64
5
ectodermal cell
5
gastrocnemius medialis(Muscle - Skeletal)
4
ELF-1
4
HUES48
4
UCSF-4
4
embryonic facial prominence
4
femur
3
ES-I3
3
arm bone
3
cardiac mesoderm primordium
3
hESC H9
3
leg bone
3
primordial germ cell
2
hindlimb muscle
2
muscle of leg
2
first pancreatic bud
2
forelimb muscle
2
skin of forearm
1
H1
1
H7
1
cardiogenic mesoderm
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic fibroblast
1
fibroblast of arm
1
hindlimb muscle
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
trophoblast giant cell
Organ
6
embryo
0
limb
Life stage
3
embryonic
Date released
3
September, 2022
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
2
r
1
abc
1
chromhmm
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
month_released!
March, 2024
Showing 6 of 6 results
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Download
FileSet
DSR245YQC
released
Annotation file set
: Candidate regulatory elements for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR803QHX
released
Annotation file set
: Chromatin states for BSS00483 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP