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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
67
muscle of arm
58
muscle of leg
25
tibial nerve
22
foreskin keratinocyte
19
foreskin fibroblast
19
tibial artery
18
gastrocnemius medialis
10
lower leg skin
9
foreskin melanocyte
8
limb
7
GM23248
5
gastrocnemius medialis(Muscle - Skeletal)
4
EH
4
EL
4
ELR
4
femur
3
arm bone
3
leg bone
2
hindlimb muscle
2
muscle of leg
2
forelimb muscle
2
skin of forearm
2
skin of prepuce of penis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
fibroblast of arm
1
hindlimb muscle
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
Organ
4
penis
0
limb
Life stage
3
newborn
1
postnatal
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR589YDI
released
Annotation file set
: Candidate regulatory elements for BSS00275 EH from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR754LTR
released
Annotation file set
: Target gene predictions for BSS00275 EH from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR752ZBL
released
Annotation file set
: Chromatin states for BSS00275 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR483QPJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE EH
Lab:
AMP-T2D consortium
Project:
AMP