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Schema
Citing CMDGA
Clear Filters
Annotation type
256
gene expression
222
accessible chromatin
139
target gene predictions
120
candidate regulatory elements
93
differential activity
68
chromatin state
49
binding sites
42
variant allelic effects
38
histone modifications
11
eQTL
3
Fine-mapped variants
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
2
endothelial cell
1
liver
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
1
February, 2023
1
May, 2022
1
October, 2022
Software used
3
rasqual
2
eigenmt
Lab
1
AMP-T2D consortium
1
Karen Mohlke, UNC
1
Stephen Parker, UMich
Project
3
AMP
RFA
2
AMP
1
AMP2
Showing 3 of 3 results
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FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP