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Schema
Citing CMDGA
Clear Filters
Annotation type
24
accessible chromatin
24
gene expression
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
snATAC-seq
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
liver
Organ
43
epithelium
18
connective tissue
18
vasculature
17
brain
16
kidney
12
blood vessel
12
heart
11
pancreas
9
musculature of body
8
limb
6
artery
5
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
1
adult
1
fetal
Date released
3
May, 2020
1
February, 2024
1
May, 2022
Software used
4
deltasvm
1
eigenmt
1
rasqual
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
1
Karen Mohlke, UNC
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR134FAU
released
Annotation file set
: Variant allelic effects of hepatic stellate cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP