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Schema
Citing CMDGA
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Annotation type
5
histone modifications
4
candidate regulatory elements
4
target gene predictions
3
Fine-mapped variants
3
binding sites
3
chromatin state
2
accessible chromatin
1
eQTL
1
gene expression
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
cell line
1
tissue
Biosample term
10
liver
4
hepatocyte
3
HepG2
1
HuH-7
1
HuH-7.5
1
hepatic stellate cell
1
right lobe of liver
Disease term
1
hepatocellular carcinoma
Organ
4
liver
Life stage
1
adult
1
child
Date released
2
September, 2022
1
March, 2020
1
May, 2021
Software used
2
r
1
abc
1
chicago
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR041IUM
released
Annotation file set
: Target gene predictions for BSS01519 right lobe of liver from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR306YJJ
released
Annotation file set
: Target gene predictions for BSS00558 HepG2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651DDS
released
Annotation file set
: enhancer-gene predicton of HepG2-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR499URQ
released
Annotation file set
: A target gene prediction annotation in HepG2 of DSR452PKJ pCHi-C E-MTAB-7144
Lab:
AMP-T2D consortium
Project:
AMP