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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
5
gene expression
3
histone modifications
2
chromatin state
1
target gene predictions
Annotation Category
7
cis-regulatory elements
Annotation type Category
5
ATAC-seq
1
DNase-seq
1
snATAC-seq
Available data
7
bed bed3+
7
bigWig
File set status
7
released
Genome assembly (visualization)
8
hg19
7
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
7
hepatocyte
6
endothelial cell of hepatic sinusoid
2
hepatic stellate cell
2
liver
1
HepG2
Organ
7
epithelium
7
liver
Life stage
5
adult
Date released
5
February, 2024
1
January, 2020
1
November, 2021
Software used
7
macs
Lab
5
Ines Cebola, Imperial College London
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
6
AMP
1
ENCODE
RFA
5
AMP2
1
AMP
1
ENCODE3
Showing 7 of 7 results
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FileSet
DSR084ACR
released
Annotation file set
: Accessible chromatin annotation of Hepatocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR614AYG
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR961YSK
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR909IMA
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR862SUJ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR683ANQ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 0.1nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR934SGC
released
Annotation file set
: Accessible chromatin annotation of liver hepatocyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP