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Schema
Citing CMDGA
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Annotation type
7
histone modifications
5
binding sites
5
target gene predictions
4
candidate regulatory elements
4
chromatin state
3
accessible chromatin
Annotation Category
5
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
11
tissue
5
cell line
4
primary cell
1
in vitro differentiated cells
Biosample term
3
HepG2
1
HuH-7
1
HuH-7.5
Disease term
3
hepatocellular carcinoma
Organ
64
embryo
57
bodily fluid
55
blood
55
uterus
26
lung
22
brain
15
skin of body
10
bone element
10
pituitary gland
10
prostate gland
9
lymph node
8
intestine
8
large intestine
8
mammary gland
7
kidney
5
liver
5
pancreas
4
musculature of body
4
penis
3
connective tissue
2
epithelium
2
lymphoid tissue
1
extraembryonic component
1
eye
1
gonad
1
limb
1
mouth
1
placenta
1
testis
Life stage
2
adult
1
child
Date released
3
September, 2022
1
March, 2020
1
May, 2021
Software used
3
r
1
abc
1
chicago
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR254YRT
released
Annotation file set
: Target gene predictions for BSS00719 HuH-7.5 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR628THR
released
Annotation file set
: Target gene predictions for BSS00718 HuH-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR306YJJ
released
Annotation file set
: Target gene predictions for BSS00558 HepG2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651DDS
released
Annotation file set
: enhancer-gene predicton of HepG2-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR499URQ
released
Annotation file set
: A target gene prediction annotation in HepG2 of DSR452PKJ pCHi-C E-MTAB-7144
Lab:
AMP-T2D consortium
Project:
AMP