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Schema
Citing CMDGA
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Annotation type
5
histone modifications
3
binding sites
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
16
fibroblast
10
pericyte cell
8
hepatocyte
6
adipocyte
6
endothelial cell of hepatic sinusoid
5
chondrocyte
5
osteoblast
4
fibroblast of cardiac tissue
4
liver
4
pancreatic stellate cell
3
cardiac fibroblast
3
hepatic stellate cell
3
mesenchymal stem cell
3
skin fibroblast
2
HepG2
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
GM23248
1
HuH-7
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
luteal cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
stromal cell
Organ
2
liver
0
connective tissue
Life stage
1
adult
Date released
1
February, 2021
1
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
lymphoid tissue
Showing 2 of 2 results
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Download
FileSet
DSR848MAN
released
Annotation file set
: Accessible chromatin of E-MTAB-7543 - ATAC-seq of HepG2 cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR505YPM
released
Annotation file set
: Accessible chromatin annotation for Liver Hep G2 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP