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Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
5
HepG2
4
hepatocyte
2
hepatic stellate cell
2
liver
1
CMK
1
GM06990
1
GM10847
1
GM12872
1
GM12873
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
HAP-1
1
HL-60
1
HuH-7
1
K562
1
OCI-LY7
1
RPMI8226
1
SUDHL6
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
Organ
4
epithelium
4
liver
0
bodily fluid
Date released
3
August, 2021
1
February, 2021
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
ureter
Showing 4 of 4 results
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FileSet
DSR954EQS
released
Annotation file set
: Histone modifications annotation of H3K4me3 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR931ARL
released
Annotation file set
: Histone modifications annotation of H3K4me1 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523PSZ
released
Annotation file set
: Histone modifications annotation of H3K27ac ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR272SHL
released
Annotation file set
: Histone modifications annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP