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Citing CMDGA
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Annotation type
5
histone modifications
3
binding sites
3
target gene predictions
2
accessible chromatin
2
candidate regulatory elements
2
chromatin state
Annotation Category
3
Target gene links
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
10
liver
5
keratinocyte
4
fibroblast of dermis
4
foreskin keratinocyte
4
hepatocyte
3
HepG2
3
breast epithelium
3
foreskin fibroblast
3
skin fibroblast
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
iPS DF 19.11
2
lower leg skin
1
COLO829
1
GM23248
1
HuH-7
1
HuH-7.5
1
RPMI7951
1
SK-MEL-5
1
basal cell of epidermis
1
epidermal melanocyte
1
fibroblast of arm
1
granular cell of epidermis
1
hepatic stellate cell
1
iPS DF 19.7
1
iPS DF 4.7 Cell Line
1
iPS DF 6.9
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
right lobe of liver
1
skin of body
Disease term
1
hepatocellular carcinoma
Organ
3
liver
0
breast
0
skin of body
Life stage
1
child
Date released
1
March, 2020
1
May, 2021
1
September, 2022
Software used
1
abc
1
chicago
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR306YJJ
released
Annotation file set
: Target gene predictions for BSS00558 HepG2 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651DDS
released
Annotation file set
: enhancer-gene predicton of HepG2-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR499URQ
released
Annotation file set
: A target gene prediction annotation in HepG2 of DSR452PKJ pCHi-C E-MTAB-7144
Lab:
AMP-T2D consortium
Project:
AMP