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Schema
Citing CMDGA
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Annotation type
13
gene expression
8
accessible chromatin
4
histone modifications
4
target gene predictions
3
candidate regulatory elements
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
5
HepG2
4
hepatocyte
2
fibroblast
2
fibroblast of cardiac tissue
2
foreskin fibroblast
2
hepatic stellate cell
2
liver
2
osteoblast
2
preadipocyte
1
GM23248
1
HuH-7
1
adipocyte
1
adipose tissue derived mesenchymal stem cell
1
cartilage tissue
1
chondrocyte
1
columnar chondrocyte
1
embryonic fibroblast
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
mesenchymal stem cell
1
pulmonary interstitial fibroblast
1
skin fibroblast
Organ
4
epithelium
4
liver
0
connective tissue
Date released
3
August, 2021
1
February, 2021
Software used
4
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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FileSet
DSR954EQS
released
Annotation file set
: Histone modifications annotation of H3K4me3 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR931ARL
released
Annotation file set
: Histone modifications annotation of H3K4me1 ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR523PSZ
released
Annotation file set
: Histone modifications annotation of H3K27ac ChIPseq from ChIP-sequencing for histone modifications in primary human hepatocytes from three individuals heterozygous for the T2D risk haplotype at the SLC16A11 locus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR272SHL
released
Annotation file set
: Histone modifications annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP