Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
44
candidate regulatory elements
32
accessible chromatin
30
target gene predictions
25
binding sites
25
chromatin state
24
gene expression
18
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
snATAC-seq
Available data
3
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
hepatocyte
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
Organ
41
epithelium
17
brain
16
connective tissue
16
kidney
15
vasculature
11
pancreas
10
heart
9
blood vessel
8
limb
7
musculature of body
4
artery
4
liver
3
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
nerve
2
stomach
1
adrenal gland
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
0
lymph node
Life stage
1
adult
1
fetal
Date released
3
May, 2020
1
February, 2024
Software used
4
deltasvm
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
organ_slims!
bronchus
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR179RJC
released
Annotation file set
: Variant allelic effects annotation of Hepatocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR134FAU
released
Annotation file set
: Variant allelic effects of hepatic stellate cell ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR438ODC
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver fetal ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488RFU
released
Annotation file set
: Genetic variants with deltaSVM predictions in liver hepatocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP