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Citing CMDGA
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Annotation type
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
35
lung
26
A549
26
left lung
23
right lung
10
fibroblast of lung
10
upper lobe of left lung
7
IMR-90
7
type II pneumocyte
6
PC-9
5
WI38
4
type I pneumocyte
3
lung microvascular endothelial cell
2
NCI-H226 cell
2
NCI-H460 cell
1
NCI-H226
1
NCI-H460
1
endothelial cell of artery
1
lung neuroendocrine cell
Disease term
1
squamous cell carcinoma
Organ
2
lung
Life stage
1
adult
Date released
1
June, 2020
1
September, 2022
Software used
r
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
software_used.software.name!
r
Showing 2 of 2 results
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Download
FileSet
DSR379SBY
released
Annotation file set
: Chromatin states for BSS01359 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR739JRN
released
Annotation file set
: Accessible chromatin annotation for Lung NCI-H226 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP