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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
68
lung
62
A549
52
left lung
45
right lung
16
fibroblast of lung
16
upper lobe of left lung
9
IMR-90
8
PC-9
7
WI38
7
type II pneumocyte
5
lung microvascular endothelial cell
4
NCI-H226 cell
4
NCI-H460 cell
4
type I pneumocyte
1
NCI-H226
1
NCI-H460
1
endothelial cell of artery
1
lung neuroendocrine cell
Disease term
3
squamous cell carcinoma
Organ
5
lung
Life stage
3
adult
1
unknown
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
spinal cord
Showing 5 of 5 results
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Download
FileSet
DSR141LHZ
released
Annotation file set
: Candidate regulatory elements for BSS01359 NCI-H226 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR683CJE
released
Annotation file set
: Target gene predictions for BSS01359 NCI-H226 cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379SBY
released
Annotation file set
: Chromatin states for BSS01359 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196UND
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE NCI-H460
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR739JRN
released
Annotation file set
: Accessible chromatin annotation for Lung NCI-H226 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP