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Schema
Citing CMDGA
Clear Filters
Annotation type
8
target gene predictions
2
binding sites
2
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
19
A549
16
lung
13
left lung
12
right lung
8
K562
4
fibroblast of lung
4
type II pneumocyte
4
upper lobe of left lung
3
GM12878
3
NAMALWA cell
3
type I pneumocyte
2
CMK
2
GM06990
2
GM19240
2
HAP-1
2
HL-60
2
IMR-90
2
KBM-7
2
NCI-H226 cell
2
OCI-LY7
2
PC-9
2
RPMI8226
1
GM12875
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
NB4
1
NCI-H460 cell
1
WI38
1
endothelial cell of artery
1
lung microvascular endothelial cell
1
lung neuroendocrine cell
1
peripheral blood stem cell
Organ
3
blood
3
bodily fluid
0
lung
Life stage
2
adult
Date released
1
August, 2017
1
June, 2020
1
September, 2022
Software used
2
chromhmm
1
macs
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR665OQJ
released
Annotation file set
: Chromatin states for BSS00439 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR789FEO
released
Annotation file set
: Accessible chromatin annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR588101
released
Annotation file set
: ChromHMM 13-state model for GM12878
Lab:
Stephen Parker, UMich
Project:
AMP