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Schema
Citing CMDGA
Clear Filters
Annotation type
8
target gene predictions
2
binding sites
2
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
19
A549
16
lung
13
left lung
11
right lung
8
K562
4
fibroblast of lung
4
upper lobe of left lung
3
GM12878
2
CMK
2
GM06990
2
GM12864
2
GM12865
2
GM12875
2
GM12891
2
GM12892
2
GM19238
2
GM19239
2
GM19240
2
HAP-1
2
HL-60
2
IMR-90
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
RPMI8226
1
DND-41
1
GM10248
1
GM10266
1
GM10847
1
GM12866
1
GM12872
1
GM12873
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
KBM-7
1
KOPT-K1
1
Loucy
1
NB4
1
NCI-H226 cell
1
NCI-H460 cell
1
WI38
1
lung microvascular endothelial cell
1
peripheral blood mononuclear cell
1
peripheral blood stem cell
Organ
3
blood
3
bodily fluid
0
lung
0
lymph node
Life stage
2
adult
Date released
1
August, 2017
1
February, 2021
1
September, 2022
Software used
2
chromhmm
1
macs
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR665OQJ
released
Annotation file set
: Chromatin states for BSS00439 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549ZJZ
released
Annotation file set
: Histone modifications annotation for Blood GM12878 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR588101
released
Annotation file set
: ChromHMM 13-state model for GM12878
Lab:
Stephen Parker, UMich
Project:
AMP