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Citing CMDGA
Clear Filters
Annotation type
22
candidate regulatory elements
12
target gene predictions
11
chromatin state
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
4
type II pneumocyte
3
type I pneumocyte
2
club cell
1
A549
1
IMR-90
1
NCI-H226 cell
1
PC-9
1
bronchial epithelial cell
1
endothelial cell of artery
1
lung neuroendocrine cell
1
right lung
1
upper lobe of left lung
Organ
2
bronchus
2
epithelium
1
lung
Date released
1
April, 2020
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
1
AMP
1
ENCODE
1
LungMap
RFA
1
AMP
1
ENCODE3
1
LungMap2
Showing 3 of 3 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR661XEV
released
Annotation file set
: Accessible chromatin annotation for Lung Fetal lung from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP