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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
gene expression
3
target gene predictions
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
3
bed bed3+
2
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
Biosample term
2
endothelial cell of lymphatic vessel
1
dermis microvascular lymphatic vessel endothelial cell
Organ
205
epithelium
85
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
33
vasculature
27
musculature of body
26
heart
24
blood vessel
24
liver
21
intestine
20
limb
15
bone element
13
skin of body
12
blood
12
bodily fluid
12
embryo
12
lung
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
lymphatic vessel
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
bronchus
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Date released
2
November, 2021
1
June, 2020
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
LungMap
RFA
2
ENCODE3
1
AMP
award.project!
LungMap
Showing 3 of 3 results
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Download
FileSet
DSR427DYD
released
Annotation file set
: Accessible chromatin annotation of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR093JYI
released
Annotation file set
: Accessible chromatin annotation of Fetal Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR841NUD
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP