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Schema
Citing CMDGA
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Annotation type
4
accessible chromatin
4
candidate regulatory elements
3
gene expression
3
target gene predictions
2
binding sites
2
chromatin state
2
differential activity
1
histone modifications
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
single cell RNA-seq
1
ChIP-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
2
Lymphatic Endothelial Cell
1
dermis lymphatic vessel endothelial cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
Organ
120
epithelium
62
kidney
48
brain
39
connective tissue
39
pancreas
26
vasculature
25
bodily fluid
24
blood
18
blood vessel
18
liver
13
skin of body
11
embryo
8
intestine
8
musculature of body
7
artery
7
prostate gland
6
bone element
6
heart
5
extraembryonic component
5
large intestine
5
mammary gland
5
penis
4
eye
4
lung
4
lymph node
3
adipose tissue
3
lymphatic vessel
3
placenta
2
bone marrow
2
limb
2
trachea
2
uterus
1
bronchus
1
gonad
1
lymphoid tissue
1
pituitary gland
1
stomach
1
testis
1
thymus
1
vein
Life stage
2
adult
Date released
2
September, 2023
1
February, 2021
Software used
2
deseq2
1
macs
Lab
2
KPMP
1
AMP-T2D consortium
Project
2
KPMP
1
AMP
RFA
2
KPMP
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR840KPU
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR737GXW
released
Annotation file set
: Differential activity annotation of Lymphatic Endothelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR898ATG
released
Annotation file set
: Histone modifications annotation for Others LEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP