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Schema
Citing CMDGA
Clear Filters
Annotation type
45
candidate regulatory elements
30
target gene predictions
23
chromatin state
15
binding sites
6
histone modifications
4
accessible chromatin
3
eQTL
2
gene expression
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
4
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
luminal epithelial cell of mammary gland
1
luteal cell
1
mammary gland epithelial cell
Organ
187
epithelium
68
connective tissue
61
pancreas
53
eye
35
kidney
30
vasculature
22
blood vessel
21
brain
21
heart
21
musculature of body
19
liver
14
limb
11
intestine
10
bone element
9
lung
8
artery
8
skeleton
6
adipose tissue
6
adrenal gland
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
ureter
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
nerve
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Date released
June, 2020
4
November, 2021
Software used
4
macs
Lab
4
Bing Ren, UCSD
Project
4
ENCODE
RFA
4
ENCODE3
month_released!
June, 2020
Showing 4 of 4 results
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Download
FileSet
DSR221MTY
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR245LTB
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR492XEZ
released
Annotation file set
: Accessible chromatin annotation of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR562HUD
released
Annotation file set
: Accessible chromatin annotation of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE