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Schema
Citing CMDGA
Clear Filters
Annotation type
7
accessible chromatin
5
target gene predictions
1
variant allelic effects
Annotation Category
5
Target gene links
Annotation type Category
16
DNase-seq
ChIP-seq
5
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Biosample term
2
luminal epithelial cell of mammary gland
1
MCF-7
1
mammary epithelial cell
1
mammary gland epithelial cell
Organ
74
epithelium
57
embryo
54
uterus
38
connective tissue
32
blood
32
bodily fluid
31
pancreas
18
intestine
16
brain
13
heart
12
musculature of body
11
large intestine
10
pituitary gland
10
skin of body
8
lung
7
adrenal gland
7
liver
7
stomach
7
vasculature
6
blood vessel
5
adipose tissue
5
mammary gland
4
small intestine
3
esophagus
3
extraembryonic component
3
gonad
3
limb
3
ovary
3
thymus
2
artery
2
bone element
2
bone marrow
2
prostate gland
2
spleen
2
thyroid gland
2
vein
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
lymphoid tissue
1
penis
1
placenta
1
spinal cord
1
urinary bladder
Date released
3
November, 2021
2
May, 2021
Software used
5
abc
Lab
3
Bing Ren, UCSD
2
Jesse Engreitz, Stanford University
Project
3
ENCODE
2
AMP
RFA
3
ENCODE3
2
AMP
annotation_type_category!
ChIP-seq
Showing 5 of 5 results
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Download
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR990AWB
released
Annotation file set
: Target gene predictions of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR249DLQ
released
Annotation file set
: enhancer-gene predicton of MCF-7-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR379EHB
released
Annotation file set
: enhancer-gene predicton of mammary_epithelial_cell-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP