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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
2
ATAC-seq
2
snATAC-seq
1
ChIP-seq
Available data
4
bed bed3+
2
bigWig
1
bed bed9
File set status
5
released
Genome assembly (visualization)
7
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
5
MCF-7
5
luminal epithelial cell of mammary gland
5
mammary gland epithelial cell
2
T47D
2
myoepithelial cell of mammary gland
1
fibroblast of mammary gland
Organ
5
epithelium
5
mammary gland
Life stage
1
adult
Date released
4
November, 2021
1
September, 2022
Software used
2
abc
2
macs
1
chromhmm
Lab
4
Bing Ren, UCSD
1
AMP-T2D consortium
Project
4
ENCODE
1
AMP
RFA
4
ENCODE3
1
AMP
organ_slims!
large intestine
Showing 5 of 5 results
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Download
FileSet
DSR380JQI
released
Annotation file set
: Chromatin states for BSS01185 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR154LWM
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR114GRY
released
Annotation file set
: Target gene predictions of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR221MTY
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR245LTB
released
Annotation file set
: Accessible chromatin annotation of Mammary Luminal Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE