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Schema
Citing CMDGA
Clear Filters
Annotation type
4
target gene predictions
3
candidate regulatory elements
3
chromatin state
2
accessible chromatin
2
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
2
luminal epithelial cell of mammary gland
2
mammary gland epithelial cell
1
MCF-7
1
fibroblast of mammary gland
1
mammary epithelial cell
Organ
2
epithelium
2
mammary gland
Date released
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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lymph node
uterus
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Download
FileSet
DSR492XEZ
released
Annotation file set
: Accessible chromatin annotation of Mammary Epithelial from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR534MWT
released
Annotation file set
: Accessible chromatin annotation for Breast Breast cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP