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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
chromatin state
2
candidate regulatory elements
2
gene expression
2
target gene predictions
1
differential activity
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed9
1
bed bed3+
1
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
16
muscle of arm
15
muscle of leg
13
muscle of back
5
MCF-7
4
gastrocnemius medialis
4
muscle of trunk
4
psoas muscle
3
mammary gland epithelial cell
3
skeletal muscle tissue
3
stomach smooth muscle
2
T47D
2
esophagus muscularis mucosa
2
myoepithelial cell of mammary gland
2
rectum smooth muscle tissue
2
skeletal muscle satellite cell
1
A673
1
LHCN-M2
1
SJCRH30
1
fibroblast of mammary gland
1
gastroesophageal sphincter
1
luminal epithelial cell of mammary gland
1
mammary epithelial cell
1
skeletal muscle
1
skeletal muscle cell
Organ
3
musculature of body
0
mammary gland
Life stage
2
adult
Date released
1
August, 2017
1
October, 2019
1
September, 2022
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR365BMM
released
Annotation file set
: Chromatin states for BSS01576 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195QYE
released
Annotation file set
: ChromHMM 15-state model for adult Skeletal Muscle Satellite Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR344424
released
Annotation file set
: ChromHMM 13-state model for skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP