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Citing CMDGA
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Annotation type
7
candidate regulatory elements
6
chromatin state
6
target gene predictions
2
accessible chromatin
2
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
5
bed bed9
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
3
primary cell
3
tissue
Biosample term
15
small intestine
5
MCF-7
3
duodenal mucosa
3
mammary gland epithelial cell
2
T47D
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
1
fibroblast of mammary gland
1
luminal epithelial cell of mammary gland
1
mammary epithelial cell
Organ
3
epithelium
3
intestine
3
mammary gland
3
small intestine
Life stage
4
adult
1
unknown
Date released
5
September, 2022
1
August, 2017
Software used
6
chromhmm
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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FileSet
DSR267DXB
released
Annotation file set
: Chromatin states for BSS01213 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285UOJ
released
Annotation file set
: Chromatin states for BSS01211 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887SUU
released
Annotation file set
: Chromatin states for BSS01209 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR532BPR
released
Annotation file set
: Chromatin states for BSS00271 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR092CAR
released
Annotation file set
: Chromatin states for BSS00270 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR459407
released
Annotation file set
: ChromHMM 13-state model for duodenum mucosa
Lab:
Stephen Parker, UMich
Project:
AMP