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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
45
islet of Langerhans
25
pancreatic ductal cell
24
body of pancreas
22
pancreas
21
EndoC_BH1
18
pancreatic acinar cell
18
pancreatic beta cell
17
pancreatic alpha cell
16
pancreatic delta cell
15
endocrine pancreas
11
breast epithelium
10
pancreatic stellate cell
9
tongue
6
pancreatic polypeptide-secreting cell
5
Panc1
4
ACC112
4
fibroblast of gingiva
4
pancreatic A cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
type B pancreatic cell
3
8988T
3
HPDE6-E6E7
3
pancreatic quiescent stellate cell
2
minor salivary gland
2
pancreatic endocrine cell
1
activated pancreatic stellate cell
1
breast
1
breast - mammary tissue
1
pancreatic D cell
1
pancreatic PP cell
1
quiescent pancreatic stellate cell
Disease term
3
adenoid cystic carcinoma
Organ
4
mouth
0
breast
0
pancreas
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR123CDK
released
Annotation file set
: Candidate regulatory elements for BSS00036 ACC112 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR161DVJ
released
Annotation file set
: Target gene predictions for BSS00036 ACC112 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR981JBX
released
Annotation file set
: Chromatin states for BSS00036 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR454AVC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ACC112
Lab:
AMP-T2D consortium
Project:
AMP