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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
4
candidate regulatory elements
4
target gene predictions
3
chromatin state
2
gene expression
Annotation Category
4
Target gene links
Annotation type Category
3
DNase-seq
2
ATAC-seq
2
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
2
cell line
2
primary cell
Biosample term
16
muscle of arm
14
muscle of leg
13
muscle of back
8
psoas muscle
5
gastrocnemius medialis
5
muscle of trunk
3
skeletal muscle tissue
2
A673
2
esophagus muscularis mucosa
2
skeletal muscle satellite cell
2
stomach smooth muscle
1
LHCN-M2
1
SJCRH30
1
gastroesophageal sphincter
1
myotube
1
rectum smooth muscle tissue
1
skeletal muscle cell
1
type I muscle cell
1
type II muscle cell
Disease term
1
Ewing sarcoma
Organ
4
musculature of body
Life stage
1
adult
1
child
Date released
2
September, 2022
1
May, 2021
1
November, 2021
Software used
2
abc
2
r
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
3
AMP
1
ENCODE
RFA
3
AMP
1
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR326ORZ
released
Annotation file set
: Target gene predictions for BSS01576 skeletal muscle satellite cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR920UVL
released
Annotation file set
: Target gene predictions of Satellite Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP