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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
50
muscle of arm
42
muscle of leg
41
muscle of back
16
psoas muscle
14
gastrocnemius medialis
13
muscle of trunk
13
skeletal muscle tissue
8
esophagus muscularis mucosa
7
skeletal muscle satellite cell
7
stomach smooth muscle
6
LHCN-M2
6
gastroesophageal sphincter
6
skeletal muscle fiber
5
myotube
5
type I muscle cell
5
type II muscle cell
4
A673
4
SJCRH30
4
skeletal muscle cell
3
rectum smooth muscle tissue
2
muscle of leg
2
cardiac muscle myoblast
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
hindlimb muscle
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
forelimb muscle
1
gastrocnemius medialis(Muscle - Skeletal)
1
hindlimb muscle
1
left ventricle myocardium
1
rectal smooth muscle tissue
1
smooth muscle tissue
Disease term
2
Ewing sarcoma
Organ
4
musculature of body
Life stage
2
child
1
young adult
Date released
2
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
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Download
FileSet
DSR538XCP
released
Annotation file set
: Candidate regulatory elements for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887BDZ
released
Annotation file set
: Target gene predictions for BSS00035 A673 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR958EYW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE A673
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR293FCZ
released
Annotation file set
: enhancer-gene predicton of A673-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP